DRAGEN
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Illumina Connected Software
  • Overview
    • Illumina® DRAGEN™ Secondary Analysis
    • DRAGEN Applications
    • Deployment Options
  • Product Guide
    • DRAGEN v4.4
      • Getting Started
      • DRAGEN Host Software
      • Clinical Research Workflows
      • DRAGEN Recipes
      • DRAGEN Reference Support
      • DRAGEN DNA Pipeline
        • DNA Mapping
        • Read Trimming
        • DRAGEN FASTQC
        • Sorting and Duplicate Marking
        • Small Variant Calling
        • Copy Number Variant Calling
          • Available pipelines
          • Additional documentation
            • CNV Input
            • CNV Preprocessing
            • CNV Segmentation
            • CNV Output
            • CNV ASCN module
            • CNV with SV Support
            • Cytogenetics Modality
        • Repeat Expansion Detection
        • Targeted Caller
        • Structural Variant Calling
        • VNTR Calling
        • Population Genotyping
        • Filter Duplicate Variants
        • Ploidy Calling
        • Multi Caller
        • QC Metrics Reporting
        • JSON Metrics Reporting
        • HLA Typing
        • Biomarkers
        • Downsampling
        • Unique Molecular Identifiers
        • Indel Re-aligner (Beta)
        • Star Allele Caller
        • High Coverage Analysis
        • CheckFingerprint
        • Population Haplotyping (Beta)
        • DUX4 Rearrangement Caller
      • DRAGEN RNA Pipeline
      • DRAGEN Single Cell Pipeline
      • DRAGEN Methylation Pipeline
      • DRAGEN MRD Pipeline
      • DRAGEN Amplicon Pipeline
      • DRAGEN 16S Pipeline
      • Explify Analysis Pipeline
      • BCL conversion
      • Illumina Connected Annotations
      • ORA Compression
      • Command Line Options
      • DRAGEN Reports
      • Tools and Utilities
  • Reference
    • DRAGEN Server
    • DRAGEN Application Manager
    • DRAGEN Multi-Cloud
    • DRAGEN Licensing
    • Support
    • Resource Files
    • Supplementary Information
    • DRAGEN Product Obsolescence Notices
    • F2 Validation
    • Troubleshooting
    • Citing DRAGEN software
    • DRAGEN Publications
    • Release Notes
    • Revision History
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  1. Product Guide
  2. DRAGEN v4.4
  3. DRAGEN DNA Pipeline
  4. Copy Number Variant Calling

Additional documentation

CNV InputCNV PreprocessingCNV SegmentationCNV OutputCNV ASCN moduleCNV with SV SupportCytogenetics Modality
PreviousSomatic CNV Calling ASCN (WES)NextCNV Input

Last updated 1 month ago

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