# DRAGEN Apps

- [Clinical Research Workflows](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps.md)
- [Common Product Features](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common.md)
- [Sample Sheets](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common/sample-sheet-introduction.md)
- [Run Planning](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common/run-planning.md)
- [Sample Sheet Creation in BaseSpace](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common/run-planning/basespace-run-planning-tool.md)
- [Custom Config Support](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common/run-planning/custom_config.md)
- [DRAGEN Server App](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common/server.md)
- [Advanced Topics](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common/server/advanced.md)
- [Data Management](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common/server/advanced/data-storage.md)
- [Illumina Connected Insights Local](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common/server/advanced/ici-on-prem.md)
- [ICA Cloud App](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common/cloud.md)
- [Variant Interpretation with Illumina Connected Insights](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/common/cloud/ici-setup.md)
- [DRAGEN Heme WGS Tumor Only Pipeline](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline.md)
- [Quick Start](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/quick-start.md)
- [Sample Sheet Requirements](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/quick-start/sample-sheet-requirements.md)
- [Templates](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/quick-start/sample-sheet-requirements/sample-sheet-templates.md)
- [DRAGEN Server App](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/installation.md)
- [Launching Analysis](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/installation/launching-analysis.md)
- [Command Line Options](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/installation/launching-analysis/command-line-options.md)
- [Local Specific Output](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/installation/launching-analysis/output.md)
- [Advanced Topics](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/installation/advanced.md)
- [Custom Config Support](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/installation/advanced/custom_config.md)
- [ICA Cloud App](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/setup.md)
- [Launching Analysis](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/setup/launching-analysis.md)
- [ICA Specific Output](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/setup/launching-analysis/output.md)
- [Advanced Topics](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/setup/advanced.md)
- [Custom Workflow](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/setup/advanced/workflow.md)
- [Custom Config Support](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/setup/advanced/custom_config.md)
- [Post Processing](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/setup/advanced/post-processing.md)
- [Analysis Output](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/analysis-output.md)
- [Analysis Methods](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/analysis-methods.md)
- [Troubleshooting](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-heme-wgs-to-pipeline/troubleshooting.md)
- [DRAGEN Solid WGS Tumor Normal Pipeline](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline.md)
- [Quick Start](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/quick-start.md)
- [Sample Sheet Requirements](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/quick-start/sample-sheet-requirements.md)
- [Templates](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/quick-start/sample-sheet-requirements/sample-sheet-templates.md)
- [DRAGEN Server App](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/installation.md)
- [Launching Analysis](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/installation/launching-analysis.md)
- [Command Line Options](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/installation/launching-analysis/command-line-options.md)
- [Local Specific Output](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/installation/launching-analysis/output.md)
- [Advanced Topics](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/installation/advanced.md)
- [Custom Config Support](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/installation/advanced/custom_config.md)
- [ICA Cloud App](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/setup.md)
- [Launching Analysis](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/setup/launching-analysis.md)
- [Advanced Topics](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/setup/advanced.md)
- [Custom Workflow](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/setup/advanced/workflow.md)
- [Analysis Output](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/analysis-output.md)
- [Analysis Methods](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/analysis-methods.md)
- [Troubleshooting](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-apps/dragen-solid-wgs-tn-pipeline/troubleshooting.md)
- [DRAGEN Germline Enrichment ICA App](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-germline-enrichment-ica-app.md)
- [DRAGEN Enrichment BSSH App](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-enrichment-bssh-app.md)
- [DRAGEN Germline Enrichment from BCLs BSSH App](https://help.connected.illumina.com/dragen/product-guides/dragen-v4.5/dragen-apps/dragen-germline-enrichment-from-bcls-bssh-app.md)